Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 AC096734.2-201ENST00000562054 433 ntBASIC11.74□□□□□ -0.53
UPK3BQ9BT76 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 AC092865.5-201ENST00000545435 363 ntBASIC11.73□□□□□ -0.53
UPK3BQ9BT76 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms