Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 AP001094.4-201ENST00000579008 2176 ntBASIC17.38■□□□□ 0.37
CDK5RAP1Q96SZ6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AL592309.1-201ENST00000443127 649 ntBASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 KRT8P48-201ENST00000515599 1220 ntBASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 IGHV3-62-201ENST00000520057 340 ntBASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AC243562.1-201ENST00000560672 389 ntBASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP1Q96SZ6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 AC023141.5-201ENST00000458585 616 ntBASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 AC016027.1-202ENST00000607927 1699 ntBASIC17.36■□□□□ 0.37
CDK5RAP1Q96SZ6 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 AC099398.1-201ENST00000567919 2776 ntBASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms