Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 AL035456.1-201ENST00000456064 1369 ntBASIC18.07■□□□□ 0.48
LRCH3Q96II8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 MIR1247-201ENST00000408206 136 ntBASIC18.07■□□□□ 0.48
LRCH3Q96II8 GPAA1P2-201ENST00000417923 928 ntBASIC18.07■□□□□ 0.48
LRCH3Q96II8 ZNF767P-206ENST00000513792 565 ntBASIC18.07■□□□□ 0.48
LRCH3Q96II8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
LRCH3Q96II8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCH3Q96II8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 CTBP2P5-201ENST00000454986 1264 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 AC002558.1-201ENST00000488906 803 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 AC079328.1-201ENST00000560358 952 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 U62317.3-201ENST00000608319 855 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 AL021578.1-201ENST00000613646 709 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 PHGDH-209ENST00000641074 1780 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRCH3Q96II8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH3Q96II8 AL135999.2-201ENST00000622438 1686 ntBASIC18.06■□□□□ 0.48
LRCH3Q96II8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH3Q96II8 FXNP2-201ENST00000411625 547 ntBASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC005412.3-201ENST00000580309 715 ntBASIC18.05■□□□□ 0.48
LRCH3Q96II8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC106872.11-201ENST00000605838 421 ntBASIC18.05■□□□□ 0.48
LRCH3Q96II8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH3Q96II8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms