Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 PRSS29P-201ENST00000440800 595 ntBASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 VN2R19P-201ENST00000442399 1052 ntBASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 MPDU1-223ENST00000582151 728 ntBASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCC2Q8TAQ2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
SMARCC2Q8TAQ2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCC2Q8TAQ2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.64■□□□□ 0.74
SMARCC2Q8TAQ2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCC2Q8TAQ2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
SMARCC2Q8TAQ2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 AC010654.1-201ENST00000615722 808 ntBASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCC2Q8TAQ2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 AC107918.2-201ENST00000530817 355 ntBASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCC2Q8TAQ2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCC2Q8TAQ2 PGAM5P1-201ENST00000518923 814 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms