Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC090079.2-201ENST00000575289 768 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 MIR4469-201ENST00000583919 79 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC011467.2-201ENST00000598425 242 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC064836.3-201ENST00000607928 673 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC009154.2-201ENST00000621177 724 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC092053.1-201ENST00000605787 1936 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC093525.9-201ENST00000624961 1746 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 CICP6-201ENST00000457191 2729 ntBASIC13.83□□□□□ -0.2
TREML4Q6UXN2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TREML4Q6UXN2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 CNN2P11-201ENST00000429351 262 ntBASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 YBX1P5-201ENST00000509441 847 ntBASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AC112698.1-201ENST00000510299 916 ntBASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 MIR1199-201ENST00000621445 119 ntBASIC13.82□□□□□ -0.2
TREML4Q6UXN2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 RNF216P1-203ENST00000404404 2427 ntBASIC13.82□□□□□ -0.2
TREML4Q6UXN2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TREML4Q6UXN2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms