Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN8P56748 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 KRT18P31-201ENST00000506277 1292 ntBASIC15.98■□□□□ 0.15
CLDN8P56748 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 MIR3652-201ENST00000579335 131 ntBASIC15.98■□□□□ 0.15
CLDN8P56748 AC091167.2-201ENST00000579581 588 ntBASIC15.98■□□□□ 0.15
CLDN8P56748 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.98■□□□□ 0.15
CLDN8P56748 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN8P56748 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
CLDN8P56748 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN8P56748 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.98■□□□□ 0.15
CLDN8P56748 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CLDN8P56748 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLDN8P56748 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN8P56748 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CLDN8P56748 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN8P56748 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN8P56748 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.97■□□□□ 0.15
CLDN8P56748 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.97■□□□□ 0.15
CLDN8P56748 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN8P56748 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN8P56748 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN8P56748 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN8P56748 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN8P56748 PI4KAP1-204ENST00000612579 1703 ntBASIC15.97■□□□□ 0.15
CLDN8P56748 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN8P56748 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 CICP6-201ENST00000457191 2729 ntBASIC15.96■□□□□ 0.15
CLDN8P56748 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 AL031731.1-201ENST00000642131 2094 ntBASIC15.96■□□□□ 0.15
CLDN8P56748 AC007950.2-201ENST00000615045 2347 ntBASIC15.96■□□□□ 0.15
CLDN8P56748 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN8P56748 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.96■□□□□ 0.15
CLDN8P56748 AC008608.2-201ENST00000606089 416 ntBASIC15.96■□□□□ 0.15
CLDN8P56748 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN8P56748 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 GGT4P-201ENST00000623672 1708 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms