Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE6BP35913 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDE6BP35913 AC004408.2-201ENST00000623613 2777 ntBASIC20.49■□□□□ 0.87
PDE6BP35913 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE6BP35913 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6BP35913 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
PDE6BP35913 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDE6BP35913 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6BP35913 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PDE6BP35913 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6BP35913 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.48■□□□□ 0.87
PDE6BP35913 AC022210.1-201ENST00000449856 793 ntBASIC20.48■□□□□ 0.87
PDE6BP35913 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.48■□□□□ 0.87
PDE6BP35913 SPDYE18-201ENST00000510091 1050 ntBASIC20.48■□□□□ 0.87
PDE6BP35913 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.48■□□□□ 0.87
PDE6BP35913 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PDE6BP35913 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.48■□□□□ 0.87
PDE6BP35913 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.48■□□□□ 0.87
PDE6BP35913 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.48■□□□□ 0.87
PDE6BP35913 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6BP35913 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6BP35913 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.48■□□□□ 0.87
PDE6BP35913 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDE6BP35913 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PDE6BP35913 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6BP35913 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE6BP35913 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDE6BP35913 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6BP35913 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 MEP1AP4-201ENST00000423244 1087 ntBASIC20.47■□□□□ 0.87
PDE6BP35913 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 RN7SL837P-201ENST00000463010 287 ntBASIC20.47■□□□□ 0.87
PDE6BP35913 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6BP35913 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6BP35913 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6BP35913 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDE6BP35913 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE6BP35913 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.47■□□□□ 0.87
PDE6BP35913 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE6BP35913 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PDE6BP35913 SRD5A3P1-201ENST00000603021 949 ntBASIC20.47■□□□□ 0.87
PDE6BP35913 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 TUBB8P12-201ENST00000308911 1335 ntBASIC20.47■□□□□ 0.87
PDE6BP35913 TUBB7P-202ENST00000428444 1305 ntBASIC20.47■□□□□ 0.87
PDE6BP35913 TUBB8P7-204ENST00000567960 1332 ntBASIC20.47■□□□□ 0.87
PDE6BP35913 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE6BP35913 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6BP35913 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDE6BP35913 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDE6BP35913 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.46■□□□□ 0.87
PDE6BP35913 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 TTTY23B-201ENST00000442790 549 ntBASIC20.46■□□□□ 0.87
PDE6BP35913 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.46■□□□□ 0.87
PDE6BP35913 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE6BP35913 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE6BP35913 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE6BP35913 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PDE6BP35913 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6BP35913 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6BP35913 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms