Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCL3L1P16619 POLD2P1-201ENST00000511220 997 ntBASIC13.87□□□□□ -0.19
CCL3L1P16619 RNA5SP416-201ENST00000516838 111 ntBASIC13.87□□□□□ -0.19
CCL3L1P16619 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL3L1P16619 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 AC091167.2-201ENST00000579581 588 ntBASIC13.87□□□□□ -0.19
CCL3L1P16619 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCL3L1P16619 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL3L1P16619 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCL3L1P16619 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL3L1P16619 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL3L1P16619 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL3L1P16619 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 LINC00895-201ENST00000629028 1637 ntBASIC13.86□□□□□ -0.19
CCL3L1P16619 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 MIR574-201ENST00000385209 96 ntBASIC13.86□□□□□ -0.19
CCL3L1P16619 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL3L1P16619 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CCL3L1P16619 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 AL591424.1-201ENST00000442569 1213 ntBASIC13.86□□□□□ -0.19
CCL3L1P16619 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
CCL3L1P16619 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.86□□□□□ -0.19
CCL3L1P16619 AC096734.2-201ENST00000562054 433 ntBASIC13.86□□□□□ -0.19
CCL3L1P16619 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 FAM197Y3-203ENST00000618346 717 ntBASIC13.86□□□□□ -0.19
CCL3L1P16619 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL3L1P16619 BCAR1-209ENST00000546196 1340 ntBASIC13.86□□□□□ -0.19
CCL3L1P16619 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCL3L1P16619 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL3L1P16619 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL3L1P16619 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CCL3L1P16619 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL3L1P16619 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCL3L1P16619 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 KRT18P58-201ENST00000527480 1120 ntBASIC13.85□□□□□ -0.19
CCL3L1P16619 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 AC087641.1-201ENST00000557561 1021 ntBASIC13.85□□□□□ -0.19
CCL3L1P16619 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL3L1P16619 MIR4492-201ENST00000581627 80 ntBASIC13.85□□□□□ -0.19
CCL3L1P16619 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 AC004877.2-201ENST00000623941 599 ntBASIC13.85□□□□□ -0.19
CCL3L1P16619 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL3L1P16619 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL3L1P16619 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.85□□□□□ -0.19
CCL3L1P16619 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL3L1P16619 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms