Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
MTHFD1P11586 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFD1P11586 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFD1P11586 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MTHFD1P11586 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.65■□□□□ 0.26
MTHFD1P11586 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MTHFD1P11586 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.64■□□□□ 0.26
MTHFD1P11586 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
MTHFD1P11586 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MTHFD1P11586 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
MTHFD1P11586 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.64■□□□□ 0.25
MTHFD1P11586 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 IGLL3P-201ENST00000412472 434 ntBASIC16.64■□□□□ 0.25
MTHFD1P11586 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.64■□□□□ 0.25
MTHFD1P11586 SLC25A6P2-201ENST00000497974 877 ntBASIC16.64■□□□□ 0.25
MTHFD1P11586 PGAM5P1-201ENST00000518923 814 ntBASIC16.64■□□□□ 0.25
MTHFD1P11586 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
MTHFD1P11586 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.64■□□□□ 0.25
MTHFD1P11586 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.64■□□□□ 0.25
MTHFD1P11586 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.64■□□□□ 0.25
MTHFD1P11586 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.64■□□□□ 0.25
MTHFD1P11586 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 LINC02199-201ENST00000506655 2702 ntBASIC16.64■□□□□ 0.25
MTHFD1P11586 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MTHFD1P11586 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
MTHFD1P11586 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MTHFD1P11586 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFD1P11586 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.63■□□□□ 0.25
MTHFD1P11586 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
MTHFD1P11586 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MTHFD1P11586 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MTHFD1P11586 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.63■□□□□ 0.25
MTHFD1P11586 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.63■□□□□ 0.25
MTHFD1P11586 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.63■□□□□ 0.25
MTHFD1P11586 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
MTHFD1P11586 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFD1P11586 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.63■□□□□ 0.25
MTHFD1P11586 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFD1P11586 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFD1P11586 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFD1P11586 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MTHFD1P11586 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MTHFD1P11586 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
MTHFD1P11586 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFD1P11586 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms