Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RN7SL589P-201ENST00000481268 310 ntBASIC19.98■□□□□ 0.79
MBD4O95243 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
MBD4O95243 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.98■□□□□ 0.79
MBD4O95243 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.98■□□□□ 0.79
MBD4O95243 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.98■□□□□ 0.79
MBD4O95243 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.98■□□□□ 0.79
MBD4O95243 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.98■□□□□ 0.79
MBD4O95243 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.98■□□□□ 0.79
MBD4O95243 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MBD4O95243 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MBD4O95243 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.97■□□□□ 0.79
MBD4O95243 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 AC093520.2-201ENST00000561830 333 ntBASIC19.97■□□□□ 0.79
MBD4O95243 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 AC004835.2-201ENST00000603762 682 ntBASIC19.97■□□□□ 0.79
MBD4O95243 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.97■□□□□ 0.79
MBD4O95243 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.97■□□□□ 0.79
MBD4O95243 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.97■□□□□ 0.79
MBD4O95243 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MBD4O95243 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MBD4O95243 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 AL512652.2-201ENST00000625156 1716 ntBASIC19.96■□□□□ 0.79
MBD4O95243 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MBD4O95243 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MBD4O95243 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.96■□□□□ 0.79
MBD4O95243 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 SPCS2P4-201ENST00000436160 681 ntBASIC19.96■□□□□ 0.79
MBD4O95243 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 AL139011.1-202ENST00000642063 584 ntBASIC19.96■□□□□ 0.79
MBD4O95243 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MBD4O95243 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.96■□□□□ 0.79
MBD4O95243 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MBD4O95243 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MBD4O95243 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD4O95243 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.95■□□□□ 0.79
MBD4O95243 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD4O95243 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD4O95243 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms