Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH8O95206 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDH8O95206 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 HMGN1P19-201ENST00000436976 333 ntBASIC16.75■□□□□ 0.27
PCDH8O95206 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH8O95206 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH8O95206 AC025678.2-201ENST00000562061 970 ntBASIC16.75■□□□□ 0.27
PCDH8O95206 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH8O95206 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
PCDH8O95206 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDH8O95206 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 LINC00628-201ENST00000628516 1289 ntBASIC16.75■□□□□ 0.27
PCDH8O95206 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 WASH6P-202ENST00000359512 1437 ntBASIC16.75■□□□□ 0.27
PCDH8O95206 PCDHB18P-201ENST00000524813 2368 ntBASIC16.75■□□□□ 0.27
PCDH8O95206 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH8O95206 AC108860.2-201ENST00000562760 2183 ntBASIC16.75■□□□□ 0.27
PCDH8O95206 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDH8O95206 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PCDH8O95206 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH8O95206 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH8O95206 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH8O95206 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.74■□□□□ 0.27
PCDH8O95206 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH8O95206 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH8O95206 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 KRT18P32-201ENST00000424695 1287 ntBASIC16.74■□□□□ 0.27
PCDH8O95206 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH8O95206 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH8O95206 CYMP-203ENST00000474680 1263 ntBASIC16.74■□□□□ 0.27
PCDH8O95206 HLA-J-203ENST00000494367 1087 ntBASIC16.74■□□□□ 0.27
PCDH8O95206 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDH8O95206 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 AC093520.2-201ENST00000561830 333 ntBASIC16.74■□□□□ 0.27
PCDH8O95206 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH8O95206 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDH8O95206 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH8O95206 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH8O95206 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH8O95206 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.74■□□□□ 0.27
PCDH8O95206 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH8O95206 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH8O95206 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH8O95206 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDH8O95206 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH8O95206 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PCDH8O95206 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms