Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL5O76039 AC009078.2-202ENST00000463353 338 ntBASIC19.52■□□□□ 0.72
CDKL5O76039 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL5O76039 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.52■□□□□ 0.72
CDKL5O76039 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.52■□□□□ 0.72
CDKL5O76039 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDKL5O76039 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.52■□□□□ 0.72
CDKL5O76039 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.52■□□□□ 0.72
CDKL5O76039 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL5O76039 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL5O76039 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL5O76039 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL5O76039 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CDKL5O76039 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDKL5O76039 HLA-A-201ENST00000376802 1334 ntBASIC19.51■□□□□ 0.71
CDKL5O76039 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDKL5O76039 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.51■□□□□ 0.71
CDKL5O76039 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 FAM185BP-201ENST00000443595 716 ntBASIC19.51■□□□□ 0.71
CDKL5O76039 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 IGHV3-22-201ENST00000520721 359 ntBASIC19.51■□□□□ 0.71
CDKL5O76039 UNC93B6-202ENST00000528242 690 ntBASIC19.51■□□□□ 0.71
CDKL5O76039 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.51■□□□□ 0.71
CDKL5O76039 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDKL5O76039 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL5O76039 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL5O76039 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDKL5O76039 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDKL5O76039 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
CDKL5O76039 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CDKL5O76039 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.5■□□□□ 0.71
CDKL5O76039 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.5■□□□□ 0.71
CDKL5O76039 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.5■□□□□ 0.71
CDKL5O76039 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.5■□□□□ 0.71
CDKL5O76039 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CDKL5O76039 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.5■□□□□ 0.71
CDKL5O76039 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.5■□□□□ 0.71
CDKL5O76039 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.5■□□□□ 0.71
CDKL5O76039 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.5■□□□□ 0.71
CDKL5O76039 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
CDKL5O76039 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.5■□□□□ 0.71
CDKL5O76039 AC009947.1-201ENST00000444350 727 ntBASIC19.5■□□□□ 0.71
CDKL5O76039 CXCL1P1-201ENST00000502804 216 ntBASIC19.5■□□□□ 0.71
CDKL5O76039 RNA5SP415-201ENST00000517246 115 ntBASIC19.5■□□□□ 0.71
CDKL5O76039 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.5■□□□□ 0.71
CDKL5O76039 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CDKL5O76039 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
CDKL5O76039 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL5O76039 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDKL5O76039 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 VN2R19P-201ENST00000442399 1052 ntBASIC19.49■□□□□ 0.71
CDKL5O76039 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.49■□□□□ 0.71
CDKL5O76039 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDKL5O76039 ACTL9-202ENST00000612068 1252 ntBASIC19.49■□□□□ 0.71
CDKL5O76039 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.49■□□□□ 0.71
CDKL5O76039 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms