Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COCHO43405 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.28■□□□□ 0.36
COCHO43405 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COCHO43405 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COCHO43405 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COCHO43405 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.27■□□□□ 0.36
COCHO43405 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.27■□□□□ 0.36
COCHO43405 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
COCHO43405 AL139011.1-202ENST00000642063 584 ntBASIC17.27■□□□□ 0.36
COCHO43405 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COCHO43405 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.27■□□□□ 0.36
COCHO43405 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
COCHO43405 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
COCHO43405 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
COCHO43405 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COCHO43405 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.27■□□□□ 0.35
COCHO43405 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
COCHO43405 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
COCHO43405 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 LETM1P2-201ENST00000597330 2178 ntBASIC17.26■□□□□ 0.35
COCHO43405 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COCHO43405 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.26■□□□□ 0.35
COCHO43405 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 AC142381.1-201ENST00000426099 345 ntBASIC17.26■□□□□ 0.35
COCHO43405 CNN2P2-201ENST00000443536 909 ntBASIC17.26■□□□□ 0.35
COCHO43405 CNN2P3-201ENST00000450201 906 ntBASIC17.26■□□□□ 0.35
COCHO43405 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.26■□□□□ 0.35
COCHO43405 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.26■□□□□ 0.35
COCHO43405 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.26■□□□□ 0.35
COCHO43405 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 ALG1L8P-201ENST00000533887 760 ntBASIC17.26■□□□□ 0.35
COCHO43405 AC069262.1-201ENST00000539058 672 ntBASIC17.26■□□□□ 0.35
COCHO43405 AL136317.3-201ENST00000618497 906 ntBASIC17.26■□□□□ 0.35
COCHO43405 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COCHO43405 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.26■□□□□ 0.35
COCHO43405 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
COCHO43405 AC005915.1-201ENST00000624912 2018 ntBASIC17.25■□□□□ 0.35
COCHO43405 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COCHO43405 AL512652.2-201ENST00000625156 1716 ntBASIC17.25■□□□□ 0.35
COCHO43405 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms