Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UPK2O00526 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.5□□□□□ -0.25
UPK2O00526 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UPK2O00526 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK2O00526 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
UPK2O00526 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
UPK2O00526 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.49□□□□□ -0.25
UPK2O00526 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 MPDU1-223ENST00000582151 728 ntBASIC13.49□□□□□ -0.25
UPK2O00526 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.49□□□□□ -0.25
UPK2O00526 AC004706.3-202ENST00000621574 984 ntBASIC13.49□□□□□ -0.25
UPK2O00526 AF228730.7-201ENST00000641842 219 ntBASIC13.49□□□□□ -0.25
UPK2O00526 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
UPK2O00526 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK2O00526 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
UPK2O00526 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK2O00526 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK2O00526 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK2O00526 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK2O00526 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK2O00526 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
UPK2O00526 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK2O00526 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK2O00526 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.48□□□□□ -0.25
UPK2O00526 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.48□□□□□ -0.25
UPK2O00526 FGFR3P6-201ENST00000457012 610 ntBASIC13.48□□□□□ -0.25
UPK2O00526 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.48□□□□□ -0.25
UPK2O00526 KRT18P31-201ENST00000506277 1292 ntBASIC13.48□□□□□ -0.25
UPK2O00526 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.48□□□□□ -0.25
UPK2O00526 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 SART3-203ENST00000546611 1184 ntBASIC13.48□□□□□ -0.25
UPK2O00526 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.48□□□□□ -0.25
UPK2O00526 MTDHP4-201ENST00000600287 670 ntBASIC13.48□□□□□ -0.25
UPK2O00526 AC008608.2-201ENST00000606089 416 ntBASIC13.48□□□□□ -0.25
UPK2O00526 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
UPK2O00526 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK2O00526 MTHFR-217ENST00000641820 1569 ntBASIC13.48□□□□□ -0.25
UPK2O00526 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms