Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLIC4Q9Y696 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 DUSP5P1-201ENST00000441325 1139 ntBASIC19.18■□□□□ 0.66
CLIC4Q9Y696 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.18■□□□□ 0.66
CLIC4Q9Y696 AC012640.2-201ENST00000561606 901 ntBASIC19.18■□□□□ 0.66
CLIC4Q9Y696 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 AL031731.1-201ENST00000642131 2094 ntBASIC19.18■□□□□ 0.66
CLIC4Q9Y696 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLIC4Q9Y696 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.18■□□□□ 0.66
CLIC4Q9Y696 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CICP6-201ENST00000457191 2729 ntBASIC19.17■□□□□ 0.66
CLIC4Q9Y696 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 GGT4P-201ENST00000623672 1708 ntBASIC19.17■□□□□ 0.66
CLIC4Q9Y696 AC131009.4-201ENST00000624048 1740 ntBASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 AC148477.8-201ENST00000624298 468 ntBASIC19.17■□□□□ 0.66
CLIC4Q9Y696 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC4Q9Y696 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms