Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 ABCD1P5-201ENST00000445663 754 ntBASIC19.33■□□□□ 0.68
USP25Q9UHP3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 AC091076.1-201ENST00000610741 619 ntBASIC19.33■□□□□ 0.68
USP25Q9UHP3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 AC073592.4-201ENST00000623827 446 ntBASIC19.33■□□□□ 0.68
USP25Q9UHP3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.33■□□□□ 0.68
USP25Q9UHP3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP25Q9UHP3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 NUS1P1-201ENST00000446295 882 ntBASIC19.32■□□□□ 0.68
USP25Q9UHP3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 AP000867.3-201ENST00000524675 377 ntBASIC19.32■□□□□ 0.68
USP25Q9UHP3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP25Q9UHP3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP25Q9UHP3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 AC005052.1-201ENST00000625181 2492 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 TUBB8P12-201ENST00000308911 1335 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 TUBB7P-202ENST00000428444 1305 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 TUBB8P7-204ENST00000567960 1332 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 AP002490.2-201ENST00000524791 560 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 MIR5100-201ENST00000579544 119 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 AL358472.4-201ENST00000633140 710 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 AC144831.1-201ENST00000573312 2656 ntBASIC19.31■□□□□ 0.68
USP25Q9UHP3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP25Q9UHP3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.31■□□□□ 0.68
USP25Q9UHP3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP25Q9UHP3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
USP25Q9UHP3 AC148477.5-201ENST00000625164 1645 ntBASIC19.3■□□□□ 0.68
USP25Q9UHP3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms