Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 RN7SL510P-201ENST00000581311 263 ntBASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 NKAPP1-205ENST00000585790 367 ntBASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 MTDHP4-201ENST00000600287 670 ntBASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 AC093525.9-201ENST00000624961 1746 ntBASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC00474Q9P2X8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 AC012313.10-201ENST00000623509 926 ntBASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 GPR89P-201ENST00000407924 1495 ntBASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00474Q9P2X8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms