Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 LINC01238-205ENST00000567549 1107 ntBASIC16.22■□□□□ 0.19
VPS33AQ96AX1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.21■□□□□ 0.19
VPS33AQ96AX1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 CHCHD2P8-201ENST00000429873 447 ntBASIC16.21■□□□□ 0.19
VPS33AQ96AX1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 AC063926.3-201ENST00000624734 5658 ntBASIC16.21■□□□□ 0.19
VPS33AQ96AX1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VPS33AQ96AX1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VPS33AQ96AX1 AC022188.1-201ENST00000620960 1664 ntBASIC16.21■□□□□ 0.18
VPS33AQ96AX1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.21■□□□□ 0.18
VPS33AQ96AX1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
VPS33AQ96AX1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS33AQ96AX1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.21■□□□□ 0.18
VPS33AQ96AX1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 INTS4P1-201ENST00000438455 1935 ntBASIC16.2■□□□□ 0.18
VPS33AQ96AX1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS33AQ96AX1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms