Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 DNM1P41-201ENST00000623634 3350 ntBASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 KRT18P68-201ENST00000392293 1000 ntBASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 YBX1P10-201ENST00000444752 975 ntBASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PTPRVP-205ENST00000641549 5067 ntBASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 CYP2T1P-202ENST00000641596 2535 ntBASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SPTSSBQ8NFR3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AC008556.1-201ENST00000610908 2040 ntBASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms