Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 AC091167.2-201ENST00000579581 588 ntBASIC16.25■□□□□ 0.19
KRT78Q8N1N4 AC013467.2-201ENST00000605472 835 ntBASIC16.25■□□□□ 0.19
KRT78Q8N1N4 MIR7706-201ENST00000613747 67 ntBASIC16.25■□□□□ 0.19
KRT78Q8N1N4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.25■□□□□ 0.19
KRT78Q8N1N4 AC117500.6-201ENST00000624871 588 ntBASIC16.25■□□□□ 0.19
KRT78Q8N1N4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 AL645728.1-201ENST00000366221 2101 ntBASIC16.25■□□□□ 0.19
KRT78Q8N1N4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 SLC25A6P4-201ENST00000586535 553 ntBASIC16.24■□□□□ 0.19
KRT78Q8N1N4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.24■□□□□ 0.19
KRT78Q8N1N4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 RNF216P1-203ENST00000404404 2427 ntBASIC16.24■□□□□ 0.19
KRT78Q8N1N4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT78Q8N1N4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AC006277.1-201ENST00000624348 1610 ntBASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms