Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00346Q8IVM7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 KRT8P49-201ENST00000604166 1432 ntBASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 ALOX12P2-203ENST00000570921 1945 ntBASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 LINC01711-201ENST00000598340 967 ntBASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00346Q8IVM7 NFIC-211ENST00000641145 8399 ntBASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SAPCD2P3-201ENST00000455031 850 ntBASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SCARNA2-201ENST00000458748 420 ntBASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 AF238378.1-201ENST00000526806 358 ntBASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 CLEC4GP1-201ENST00000596555 870 ntBASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 IFNL4P1-201ENST00000607083 540 ntBASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00346Q8IVM7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms