Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 AC097493.4-201ENST00000641197 219 ntBASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRTM1Q86UE6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 SIGLEC30P-201ENST00000455569 941 ntBASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AC011498.5-201ENST00000592027 486 ntBASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AC133561.5-201ENST00000635547 218 ntBASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AL136379.1-201ENST00000623471 2642 ntBASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 AC092384.3-202ENST00000564646 2873 ntBASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM1Q86UE6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM1Q86UE6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms