Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.71■□□□□ 0.11
REEP3Q6NUK4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
REEP3Q6NUK4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 AL356309.3-201ENST00000624132 1934 ntBASIC15.7■□□□□ 0.1
REEP3Q6NUK4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 PCDHA1-201ENST00000378133 2726 ntBASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 AL139424.1-201ENST00000607572 797 ntBASIC15.7■□□□□ 0.1
REEP3Q6NUK4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 MTHFR-217ENST00000641820 1569 ntBASIC15.7■□□□□ 0.1
REEP3Q6NUK4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
REEP3Q6NUK4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
REEP3Q6NUK4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 AC008741.2-201ENST00000612792 3115 ntBASIC15.68■□□□□ 0.1
REEP3Q6NUK4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
REEP3Q6NUK4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms