Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.91□□□□□ -0.18
SNCAP37840 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.91□□□□□ -0.18
SNCAP37840 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
SNCAP37840 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.91□□□□□ -0.18
SNCAP37840 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.91□□□□□ -0.18
SNCAP37840 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
SNCAP37840 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.91□□□□□ -0.18
SNCAP37840 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.91□□□□□ -0.18
SNCAP37840 AC005332.3-201ENST00000589904 676 ntBASIC13.91□□□□□ -0.18
SNCAP37840 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SNCAP37840 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.91□□□□□ -0.18
SNCAP37840 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.9□□□□□ -0.18
SNCAP37840 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.9□□□□□ -0.18
SNCAP37840 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SNCAP37840 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SNCAP37840 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SNCAP37840 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SNCAP37840 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 COX5BP2-201ENST00000392354 334 ntBASIC13.9□□□□□ -0.18
SNCAP37840 RNF152P1-201ENST00000397754 604 ntBASIC13.9□□□□□ -0.18
SNCAP37840 TSPY5P-201ENST00000426936 936 ntBASIC13.9□□□□□ -0.18
SNCAP37840 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.9□□□□□ -0.18
SNCAP37840 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.9□□□□□ -0.18
SNCAP37840 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.9□□□□□ -0.18
SNCAP37840 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.9□□□□□ -0.18
SNCAP37840 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.9□□□□□ -0.18
SNCAP37840 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SNCAP37840 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.9□□□□□ -0.18
SNCAP37840 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.9□□□□□ -0.18
SNCAP37840 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SNCAP37840 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.9□□□□□ -0.18
SNCAP37840 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNCAP37840 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.9□□□□□ -0.19
SNCAP37840 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNCAP37840 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SNCAP37840 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.9□□□□□ -0.19
SNCAP37840 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SNCAP37840 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.89□□□□□ -0.19
SNCAP37840 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SNCAP37840 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.89□□□□□ -0.19
SNCAP37840 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.89□□□□□ -0.19
SNCAP37840 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNCAP37840 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms