Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HOXC12P31275 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 ELL2P1-201ENST00000413990 1906 ntBASIC14.94□□□□□ -0.02
HOXC12P31275 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 AC116353.5-201ENST00000638148 1699 ntBASIC14.94□□□□□ -0.02
HOXC12P31275 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
HOXC12P31275 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.94□□□□□ -0.02
HOXC12P31275 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.94□□□□□ -0.02
HOXC12P31275 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.94□□□□□ -0.02
HOXC12P31275 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.94□□□□□ -0.02
HOXC12P31275 AC239800.4-201ENST00000603712 296 ntBASIC14.94□□□□□ -0.02
HOXC12P31275 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 AC106028.4-201ENST00000614509 607 ntBASIC14.94□□□□□ -0.02
HOXC12P31275 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.94□□□□□ -0.02
HOXC12P31275 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HOXC12P31275 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.94□□□□□ -0.02
HOXC12P31275 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.93□□□□□ -0.02
HOXC12P31275 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HOXC12P31275 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.93□□□□□ -0.02
HOXC12P31275 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HOXC12P31275 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 AC087163.2-201ENST00000457299 853 ntBASIC14.93□□□□□ -0.02
HOXC12P31275 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HOXC12P31275 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.93□□□□□ -0.02
HOXC12P31275 SPCS2P1-201ENST00000561636 679 ntBASIC14.93□□□□□ -0.02
HOXC12P31275 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.93□□□□□ -0.02
HOXC12P31275 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 AL021920.2-201ENST00000624828 1351 ntBASIC14.93□□□□□ -0.02
HOXC12P31275 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.93□□□□□ -0.02
HOXC12P31275 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HOXC12P31275 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms