Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.59■□□□□ 0.89
ITGA6P23229 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.59■□□□□ 0.89
ITGA6P23229 MIR4453-201ENST00000584019 89 ntBASIC20.59■□□□□ 0.89
ITGA6P23229 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA6P23229 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ITGA6P23229 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.59■□□□□ 0.89
ITGA6P23229 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITGA6P23229 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ITGA6P23229 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ITGA6P23229 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 PCDHB18P-201ENST00000524813 2368 ntBASIC20.58■□□□□ 0.89
ITGA6P23229 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.58■□□□□ 0.89
ITGA6P23229 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ITGA6P23229 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ITGA6P23229 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA6P23229 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.58■□□□□ 0.89
ITGA6P23229 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA6P23229 PRYP6-201ENST00000514804 343 ntBASIC20.58■□□□□ 0.89
ITGA6P23229 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA6P23229 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.58■□□□□ 0.89
ITGA6P23229 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITGA6P23229 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.58■□□□□ 0.89
ITGA6P23229 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA6P23229 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.58■□□□□ 0.89
ITGA6P23229 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ITGA6P23229 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGA6P23229 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGA6P23229 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ITGA6P23229 AP3S2-216ENST00000617003 1561 ntBASIC20.58■□□□□ 0.88
ITGA6P23229 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.58■□□□□ 0.88
ITGA6P23229 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGA6P23229 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 AC073439.1-201ENST00000624121 1774 ntBASIC20.57■□□□□ 0.88
ITGA6P23229 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ITGA6P23229 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGA6P23229 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGA6P23229 RARRES2P9-201ENST00000565168 469 ntBASIC20.57■□□□□ 0.88
ITGA6P23229 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.57■□□□□ 0.88
ITGA6P23229 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.57■□□□□ 0.88
ITGA6P23229 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.57■□□□□ 0.88
ITGA6P23229 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGA6P23229 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
ITGA6P23229 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGA6P23229 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGA6P23229 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.57■□□□□ 0.88
ITGA6P23229 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
ITGA6P23229 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ITGA6P23229 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITGA6P23229 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA6P23229 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.57■□□□□ 0.88
ITGA6P23229 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGA6P23229 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGA6P23229 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.56■□□□□ 0.88
ITGA6P23229 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.56■□□□□ 0.88
ITGA6P23229 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.56■□□□□ 0.88
ITGA6P23229 RNA5SP421-201ENST00000516864 134 ntBASIC20.56■□□□□ 0.88
ITGA6P23229 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGA6P23229 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.56■□□□□ 0.88
ITGA6P23229 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.56■□□□□ 0.88
ITGA6P23229 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGA6P23229 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGA6P23229 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ITGA6P23229 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGA6P23229 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGA6P23229 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA6P23229 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms