Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFRSF1BP20333 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 ME2P1-201ENST00000426028 1970 ntBASIC15.67■□□□□ 0.1
TNFRSF1BP20333 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 IER3-202ENST00000376377 1350 ntBASIC15.67■□□□□ 0.1
TNFRSF1BP20333 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 MIR3180-1-201ENST00000580374 94 ntBASIC15.67■□□□□ 0.1
TNFRSF1BP20333 MIR3180-3-201ENST00000584616 94 ntBASIC15.67■□□□□ 0.1
TNFRSF1BP20333 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 LINC00895-201ENST00000629028 1637 ntBASIC15.67■□□□□ 0.1
TNFRSF1BP20333 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFRSF1BP20333 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC006538.1-201ENST00000567905 1585 ntBASIC15.66■□□□□ 0.1
TNFRSF1BP20333 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC243591.1-201ENST00000452967 1364 ntBASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AL021920.2-201ENST00000624828 1351 ntBASIC15.66■□□□□ 0.1
TNFRSF1BP20333 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 NUS1P2-201ENST00000417358 873 ntBASIC15.66■□□□□ 0.1
TNFRSF1BP20333 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC104819.1-201ENST00000504587 486 ntBASIC15.66■□□□□ 0.1
TNFRSF1BP20333 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC099336.1-202ENST00000602961 463 ntBASIC15.66■□□□□ 0.1
TNFRSF1BP20333 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms