Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NELFEP18615 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NELFEP18615 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NELFEP18615 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
NELFEP18615 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.71■□□□□ 0.26
NELFEP18615 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NELFEP18615 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.7■□□□□ 0.26
NELFEP18615 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 PGAM5P1-201ENST00000518923 814 ntBASIC16.7■□□□□ 0.26
NELFEP18615 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.7■□□□□ 0.26
NELFEP18615 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.7■□□□□ 0.26
NELFEP18615 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NELFEP18615 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NELFEP18615 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELFEP18615 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.7■□□□□ 0.26
NELFEP18615 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NELFEP18615 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NELFEP18615 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 AC006504.4-201ENST00000592118 1568 ntBASIC16.69■□□□□ 0.26
NELFEP18615 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
NELFEP18615 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 ELK2BP-201ENST00000415014 1224 ntBASIC16.69■□□□□ 0.26
NELFEP18615 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.69■□□□□ 0.26
NELFEP18615 KRT18P3-201ENST00000451602 1288 ntBASIC16.69■□□□□ 0.26
NELFEP18615 AL139424.1-201ENST00000607572 797 ntBASIC16.69■□□□□ 0.26
NELFEP18615 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NELFEP18615 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
NELFEP18615 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NELFEP18615 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.69■□□□□ 0.26
NELFEP18615 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
NELFEP18615 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
NELFEP18615 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NELFEP18615 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.69■□□□□ 0.26
NELFEP18615 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.69■□□□□ 0.26
NELFEP18615 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.68■□□□□ 0.26
NELFEP18615 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
NELFEP18615 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.68■□□□□ 0.26
NELFEP18615 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.68■□□□□ 0.26
NELFEP18615 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.68■□□□□ 0.26
NELFEP18615 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.68■□□□□ 0.26
NELFEP18615 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NELFEP18615 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NELFEP18615 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.68■□□□□ 0.26
NELFEP18615 BX842568.4-201ENST00000421222 227 ntBASIC16.68■□□□□ 0.26
NELFEP18615 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.68■□□□□ 0.26
NELFEP18615 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
NELFEP18615 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms