Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.32□□□□□ -0.12
CD3DP04234 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.32□□□□□ -0.12
CD3DP04234 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CD3DP04234 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.32□□□□□ -0.12
CD3DP04234 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD3DP04234 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.32□□□□□ -0.12
CD3DP04234 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.32□□□□□ -0.12
CD3DP04234 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD3DP04234 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD3DP04234 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CD3DP04234 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.31□□□□□ -0.12
CD3DP04234 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.31□□□□□ -0.12
CD3DP04234 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.31□□□□□ -0.12
CD3DP04234 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD3DP04234 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.31□□□□□ -0.12
CD3DP04234 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD3DP04234 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.31□□□□□ -0.12
CD3DP04234 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CD3DP04234 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 LINC02228-204ENST00000642115 2962 ntBASIC14.31□□□□□ -0.12
CD3DP04234 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD3DP04234 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.3□□□□□ -0.12
CD3DP04234 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.3□□□□□ -0.12
CD3DP04234 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CD3DP04234 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
CD3DP04234 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
CD3DP04234 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.3□□□□□ -0.12
CD3DP04234 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD3DP04234 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD3DP04234 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.3□□□□□ -0.12
CD3DP04234 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD3DP04234 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms