Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PCDHA1-201ENST00000378133 2726 ntBASIC14.24□□□□□ -0.13
PDCD6O75340 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDCD6O75340 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.24□□□□□ -0.13
PDCD6O75340 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.24□□□□□ -0.13
PDCD6O75340 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDCD6O75340 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.24□□□□□ -0.13
PDCD6O75340 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.24□□□□□ -0.13
PDCD6O75340 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDCD6O75340 AC046158.3-201ENST00000624947 2558 ntBASIC14.24□□□□□ -0.13
PDCD6O75340 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PDCD6O75340 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDCD6O75340 AC008741.2-201ENST00000612792 3115 ntBASIC14.24□□□□□ -0.13
PDCD6O75340 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 AC022188.1-201ENST00000620960 1664 ntBASIC14.23□□□□□ -0.13
PDCD6O75340 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
PDCD6O75340 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
PDCD6O75340 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.23□□□□□ -0.13
PDCD6O75340 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 KRT16P4-201ENST00000453883 522 ntBASIC14.23□□□□□ -0.13
PDCD6O75340 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.23□□□□□ -0.13
PDCD6O75340 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PDCD6O75340 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.23□□□□□ -0.13
PDCD6O75340 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.23□□□□□ -0.13
PDCD6O75340 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDCD6O75340 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.22□□□□□ -0.13
PDCD6O75340 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PDCD6O75340 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
PDCD6O75340 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.22□□□□□ -0.13
PDCD6O75340 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.22□□□□□ -0.13
PDCD6O75340 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 BX005266.1-201ENST00000473402 457 ntBASIC14.22□□□□□ -0.13
PDCD6O75340 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.22□□□□□ -0.13
PDCD6O75340 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.22□□□□□ -0.13
PDCD6O75340 AP001269.4-201ENST00000609611 512 ntBASIC14.22□□□□□ -0.13
PDCD6O75340 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 AL022326.1-202ENST00000641533 845 ntBASIC14.22□□□□□ -0.13
PDCD6O75340 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDCD6O75340 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDCD6O75340 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.22□□□□□ -0.13
PDCD6O75340 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDCD6O75340 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms