Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
PLOD3O60568 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.9■□□□□ 0.14
PLOD3O60568 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.9■□□□□ 0.14
PLOD3O60568 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 TPM4P1-201ENST00000436100 807 ntBASIC15.9■□□□□ 0.14
PLOD3O60568 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PLOD3O60568 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 AP002490.2-201ENST00000524791 560 ntBASIC15.9■□□□□ 0.14
PLOD3O60568 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.9■□□□□ 0.14
PLOD3O60568 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.9■□□□□ 0.14
PLOD3O60568 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PLOD3O60568 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PLOD3O60568 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PLOD3O60568 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 AC106886.4-201ENST00000623557 2502 ntBASIC15.89■□□□□ 0.13
PLOD3O60568 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.89■□□□□ 0.13
PLOD3O60568 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.89■□□□□ 0.13
PLOD3O60568 AC105339.3-201ENST00000560043 636 ntBASIC15.89■□□□□ 0.13
PLOD3O60568 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 AL773604.1-201ENST00000617417 272 ntBASIC15.89■□□□□ 0.13
PLOD3O60568 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 AC148477.8-201ENST00000624298 468 ntBASIC15.89■□□□□ 0.13
PLOD3O60568 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
PLOD3O60568 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.89■□□□□ 0.13
PLOD3O60568 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PLOD3O60568 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.89■□□□□ 0.13
PLOD3O60568 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PLOD3O60568 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PLOD3O60568 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.88■□□□□ 0.13
PLOD3O60568 PI4KAP1-204ENST00000612579 1703 ntBASIC15.88■□□□□ 0.13
PLOD3O60568 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PLOD3O60568 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms