Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHD2O14647 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHD2O14647 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.93■■□□□ 1.26
CHD2O14647 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHD2O14647 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.93■■□□□ 1.26
CHD2O14647 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CHD2O14647 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHD2O14647 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC22.93■■□□□ 1.26
CHD2O14647 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CHD2O14647 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.92■■□□□ 1.26
CHD2O14647 MPV17-206ENST00000402722 827 ntTSL 3 BASIC22.92■■□□□ 1.26
CHD2O14647 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CHD2O14647 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
CHD2O14647 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC22.92■■□□□ 1.26
CHD2O14647 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC22.92■■□□□ 1.26
CHD2O14647 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC22.92■■□□□ 1.26
CHD2O14647 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.92■■□□□ 1.26
CHD2O14647 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CHD2O14647 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC22.92■■□□□ 1.26
CHD2O14647 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHD2O14647 TPI1-206ENST00000488464 791 ntTSL 5 BASIC22.92■■□□□ 1.26
CHD2O14647 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC22.92■■□□□ 1.26
CHD2O14647 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC22.92■■□□□ 1.26
CHD2O14647 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC22.92■■□□□ 1.26
CHD2O14647 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC22.92■■□□□ 1.26
CHD2O14647 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CHD2O14647 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CHD2O14647 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC22.92■■□□□ 1.26
CHD2O14647 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CHD2O14647 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CHD2O14647 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CHD2O14647 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC22.91■■□□□ 1.26
CHD2O14647 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC22.91■■□□□ 1.26
CHD2O14647 AL442647.2-201ENST00000429864 857 ntBASIC22.91■■□□□ 1.26
CHD2O14647 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC22.91■■□□□ 1.26
CHD2O14647 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC22.91■■□□□ 1.26
CHD2O14647 LINC01115-203ENST00000606068 577 ntBASIC22.91■■□□□ 1.26
CHD2O14647 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC22.91■■□□□ 1.26
CHD2O14647 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD2O14647 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CHD2O14647 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CHD2O14647 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.9■■□□□ 1.26
CHD2O14647 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC22.9■■□□□ 1.26
CHD2O14647 HIST3H2BA-201ENST00000436555 524 ntBASIC22.9■■□□□ 1.26
CHD2O14647 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC22.9■■□□□ 1.26
CHD2O14647 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC22.9■■□□□ 1.26
CHD2O14647 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CHD2O14647 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CHD2O14647 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CHD2O14647 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHD2O14647 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHD2O14647 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC22.89■■□□□ 1.26
CHD2O14647 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CHD2O14647 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC22.89■■□□□ 1.26
CHD2O14647 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC22.89■■□□□ 1.26
CHD2O14647 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.89■■□□□ 1.26
CHD2O14647 PIGL-212ENST00000581006 554 ntTSL 4 BASIC22.89■■□□□ 1.26
CHD2O14647 BRI3BPP1-201ENST00000594224 787 ntBASIC22.89■■□□□ 1.26
CHD2O14647 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC22.89■■□□□ 1.26
CHD2O14647 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC22.89■■□□□ 1.26
CHD2O14647 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHD2O14647 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CHD2O14647 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CHD2O14647 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CHD2O14647 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CHD2O14647 AMT-232ENST00000636199 1546 ntTSL 5 BASIC22.89■■□□□ 1.26
CHD2O14647 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHD2O14647 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.89■■□□□ 1.25
CHD2O14647 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.89■■□□□ 1.25
CHD2O14647 AL354751.1-201ENST00000412768 1863 ntBASIC22.89■■□□□ 1.25
CHD2O14647 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms