Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 HYMAI-201ENST00000635591 3347 ntBASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC092647.4-201ENST00000457211 535 ntBASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC083849.1-201ENST00000615227 514 ntBASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 LINC00554-201ENST00000564841 3011 ntBASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 AC073508.3-201ENST00000619697 1419 ntBASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D4Q9Y2X8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 AC068418.2-201ENST00000577309 3703 ntBASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D4Q9Y2X8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms