Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 MTDHP3-201ENST00000594186 672 ntBASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 AL589182.2-201ENST00000619332 1049 ntBASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 AL391005.1-201ENST00000623953 2435 ntBASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 AL139011.1-202ENST00000642063 584 ntBASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.21■□□□□ 0.19
LRTM1Q9HBL6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRTM1Q9HBL6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
LRTM1Q9HBL6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.21■□□□□ 0.18
LRTM1Q9HBL6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.21■□□□□ 0.18
LRTM1Q9HBL6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.21■□□□□ 0.18
LRTM1Q9HBL6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.21■□□□□ 0.18
LRTM1Q9HBL6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 MIR3652-201ENST00000579335 131 ntBASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms