Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.34□□□□□ -0.43
MUC4Q99102 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.34□□□□□ -0.43
MUC4Q99102 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.34□□□□□ -0.43
MUC4Q99102 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.34□□□□□ -0.43
MUC4Q99102 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MUC4Q99102 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MUC4Q99102 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MUC4Q99102 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.34□□□□□ -0.43
MUC4Q99102 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MUC4Q99102 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.34□□□□□ -0.43
MUC4Q99102 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.33□□□□□ -0.43
MUC4Q99102 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.33□□□□□ -0.43
MUC4Q99102 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
MUC4Q99102 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
MUC4Q99102 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.33□□□□□ -0.44
MUC4Q99102 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 AC079776.4-201ENST00000511039 504 ntBASIC12.33□□□□□ -0.44
MUC4Q99102 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.33□□□□□ -0.44
MUC4Q99102 DUX4L17-201ENST00000557360 1267 ntBASIC12.33□□□□□ -0.44
MUC4Q99102 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
MUC4Q99102 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.33□□□□□ -0.44
MUC4Q99102 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
MUC4Q99102 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.33□□□□□ -0.44
MUC4Q99102 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.33□□□□□ -0.44
MUC4Q99102 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 NUS1P2-201ENST00000417358 873 ntBASIC12.33□□□□□ -0.44
MUC4Q99102 AL590627.1-203ENST00000421194 1026 ntBASIC12.33□□□□□ -0.44
MUC4Q99102 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.33□□□□□ -0.44
MUC4Q99102 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.33□□□□□ -0.44
MUC4Q99102 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.33□□□□□ -0.44
MUC4Q99102 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.33□□□□□ -0.44
MUC4Q99102 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 AC092119.3-201ENST00000612618 583 ntBASIC12.33□□□□□ -0.44
MUC4Q99102 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.33□□□□□ -0.44
MUC4Q99102 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MUC4Q99102 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.32□□□□□ -0.44
MUC4Q99102 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.32□□□□□ -0.44
MUC4Q99102 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
MUC4Q99102 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
MUC4Q99102 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
MUC4Q99102 AL591684.3-201ENST00000605187 298 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms