Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 AP000842.3-202ENST00000569238 1080 ntBASIC16.84■□□□□ 0.29
SIPA1Q96FS4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.84■□□□□ 0.29
SIPA1Q96FS4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIPA1Q96FS4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SIPA1Q96FS4 FER1L4-210ENST00000615531 5998 ntBASIC16.83■□□□□ 0.29
SIPA1Q96FS4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 ALG1L8P-201ENST00000533887 760 ntBASIC16.83■□□□□ 0.28
SIPA1Q96FS4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 AC140878.1-201ENST00000565277 250 ntBASIC16.83■□□□□ 0.28
SIPA1Q96FS4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 MIR6080-201ENST00000617359 66 ntBASIC16.83■□□□□ 0.28
SIPA1Q96FS4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIPA1Q96FS4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.82■□□□□ 0.28
SIPA1Q96FS4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 MIR346-201ENST00000362234 95 ntBASIC16.82■□□□□ 0.28
SIPA1Q96FS4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 COX20P2-201ENST00000452636 358 ntBASIC16.82■□□□□ 0.28
SIPA1Q96FS4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.82■□□□□ 0.28
SIPA1Q96FS4 AC021097.1-201ENST00000607902 574 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms