Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 AC022188.1-201ENST00000620960 1664 ntBASIC15.17■□□□□ 0.02
PTP4A1Q93096 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 KRT16P4-201ENST00000453883 522 ntBASIC15.17■□□□□ 0.02
PTP4A1Q93096 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 AC132872.4-202ENST00000622924 2756 ntBASIC15.17■□□□□ 0.02
PTP4A1Q93096 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTP4A1Q93096 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PTP4A1Q93096 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 AC114341.1-201ENST00000618070 349 ntBASIC15.16■□□□□ 0.02
PTP4A1Q93096 AC073592.4-201ENST00000623827 446 ntBASIC15.16■□□□□ 0.02
PTP4A1Q93096 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 KRT8P49-201ENST00000604166 1432 ntBASIC15.16■□□□□ 0.02
PTP4A1Q93096 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTP4A1Q93096 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.16■□□□□ 0.02
PTP4A1Q93096 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 TCAF2P1-201ENST00000291129 2421 ntBASIC15.15■□□□□ 0.02
PTP4A1Q93096 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTP4A1Q93096 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.15■□□□□ 0.02
PTP4A1Q93096 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms