Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 AC011558.1-201ENST00000623459 338 ntBASIC16.43■□□□□ 0.22
HIPK4Q8NE63 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 AC092384.3-202ENST00000564646 2873 ntBASIC16.43■□□□□ 0.22
HIPK4Q8NE63 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 MIR662-201ENST00000384847 95 ntBASIC16.42■□□□□ 0.22
HIPK4Q8NE63 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 BX664615.1-201ENST00000443558 458 ntBASIC16.42■□□□□ 0.22
HIPK4Q8NE63 AC092597.1-201ENST00000487352 616 ntBASIC16.42■□□□□ 0.22
HIPK4Q8NE63 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 GPR32P1-201ENST00000601788 811 ntBASIC16.42■□□□□ 0.22
HIPK4Q8NE63 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK4Q8NE63 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 AC096633.1-201ENST00000422446 749 ntBASIC16.41■□□□□ 0.22
HIPK4Q8NE63 AC068472.1-201ENST00000474589 881 ntBASIC16.41■□□□□ 0.22
HIPK4Q8NE63 AC124947.2-201ENST00000547118 1133 ntBASIC16.41■□□□□ 0.22
HIPK4Q8NE63 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms