Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 AL139327.4-201ENST00000612362 153 ntBASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 C20orf181-201ENST00000623918 480 ntBASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC105Q8IYK2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 AC073621.1-201ENST00000392730 636 ntBASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 AL022326.1-202ENST00000641533 845 ntBASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 AC079776.2-201ENST00000641154 1609 ntBASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC105Q8IYK2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 AC105020.1-201ENST00000435356 2205 ntBASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 AC006557.2-201ENST00000592985 1240 ntBASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC105Q8IYK2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms