Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
LRRC28Q86X40 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRRC28Q86X40 MINOS1P3-201ENST00000457048 203 ntBASIC15.05■□□□□ -0
LRRC28Q86X40 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.05■□□□□ -0
LRRC28Q86X40 AP005901.3-202ENST00000581653 237 ntBASIC15.05■□□□□ -0
LRRC28Q86X40 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.05■□□□□ -0
LRRC28Q86X40 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRRC28Q86X40 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
LRRC28Q86X40 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 AC092850.2-201ENST00000623821 2697 ntBASIC15.04■□□□□ -0
LRRC28Q86X40 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 NSUN5P1-202ENST00000421140 1535 ntBASIC15.04■□□□□ -0
LRRC28Q86X40 NSUN5P2-203ENST00000457352 1529 ntBASIC15.04■□□□□ -0
LRRC28Q86X40 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 TSPY19P-201ENST00000418461 509 ntBASIC15.04■□□□□ -0
LRRC28Q86X40 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 TSPY18P-201ENST00000441642 509 ntBASIC15.04■□□□□ -0
LRRC28Q86X40 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.04■□□□□ -0
LRRC28Q86X40 AC091607.1-201ENST00000490318 1060 ntBASIC15.04■□□□□ -0
LRRC28Q86X40 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.04■□□□□ -0
LRRC28Q86X40 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.04■□□□□ -0
LRRC28Q86X40 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LRRC28Q86X40 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.04■□□□□ -0
LRRC28Q86X40 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.04■□□□□ -0
LRRC28Q86X40 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.03■□□□□ -0
LRRC28Q86X40 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
LRRC28Q86X40 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.03■□□□□ -0
LRRC28Q86X40 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.03■□□□□ -0
LRRC28Q86X40 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms