Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCR9P51686 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCR9P51686 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCR9P51686 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCR9P51686 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.88□□□□□ -0.03
CCR9P51686 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCR9P51686 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCR9P51686 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCR9P51686 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 MTHFR-217ENST00000641820 1569 ntBASIC14.87□□□□□ -0.03
CCR9P51686 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.87□□□□□ -0.03
CCR9P51686 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.87□□□□□ -0.03
CCR9P51686 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCR9P51686 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.87□□□□□ -0.03
CCR9P51686 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.87□□□□□ -0.03
CCR9P51686 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.87□□□□□ -0.03
CCR9P51686 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.87□□□□□ -0.03
CCR9P51686 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 Z69720.1-201ENST00000601483 472 ntBASIC14.87□□□□□ -0.03
CCR9P51686 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.87□□□□□ -0.03
CCR9P51686 AL121956.5-201ENST00000625261 221 ntBASIC14.87□□□□□ -0.03
CCR9P51686 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.87□□□□□ -0.03
CCR9P51686 AP000867.4-201ENST00000641616 219 ntBASIC14.87□□□□□ -0.03
CCR9P51686 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 ME2P1-201ENST00000426028 1970 ntBASIC14.87□□□□□ -0.03
CCR9P51686 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.87□□□□□ -0.03
CCR9P51686 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.87□□□□□ -0.03
CCR9P51686 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.87□□□□□ -0.03
CCR9P51686 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCR9P51686 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.86□□□□□ -0.03
CCR9P51686 AC233702.3-201ENST00000578656 1387 ntBASIC14.86□□□□□ -0.03
CCR9P51686 AC016734.2-201ENST00000624325 1377 ntBASIC14.86□□□□□ -0.03
CCR9P51686 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 AL365203.3-201ENST00000609742 2057 ntBASIC14.86□□□□□ -0.03
CCR9P51686 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CCR9P51686 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCR9P51686 SIGLEC16-201ENST00000599858 1437 ntBASIC14.86□□□□□ -0.03
CCR9P51686 AC092364.2-201ENST00000596710 2692 ntBASIC14.86□□□□□ -0.03
CCR9P51686 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCR9P51686 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCR9P51686 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.86□□□□□ -0.03
CCR9P51686 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCR9P51686 SPDYE21P-201ENST00000413323 827 ntBASIC14.86□□□□□ -0.03
CCR9P51686 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 AC013467.2-201ENST00000605472 835 ntBASIC14.86□□□□□ -0.03
CCR9P51686 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.86□□□□□ -0.03
CCR9P51686 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.86□□□□□ -0.03
CCR9P51686 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms