Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.41□□□□□ -0.58
PCP4P48539 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.41□□□□□ -0.58
PCP4P48539 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC11.41□□□□□ -0.58
PCP4P48539 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PCP4P48539 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.41□□□□□ -0.58
PCP4P48539 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PCP4P48539 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PCP4P48539 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
PCP4P48539 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 AL512791.2-201ENST00000615251 4609 ntBASIC11.4□□□□□ -0.58
PCP4P48539 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PCP4P48539 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PCP4P48539 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
PCP4P48539 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
PCP4P48539 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
PCP4P48539 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PCP4P48539 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.4□□□□□ -0.59
PCP4P48539 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
PCP4P48539 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.4□□□□□ -0.59
PCP4P48539 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PCP4P48539 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.4□□□□□ -0.59
PCP4P48539 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PCP4P48539 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
PCP4P48539 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.4□□□□□ -0.59
PCP4P48539 AL583810.2-201ENST00000556430 3254 ntBASIC11.4□□□□□ -0.59
PCP4P48539 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.4□□□□□ -0.59
PCP4P48539 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 GOLGA2P11-201ENST00000562660 1621 ntBASIC11.39□□□□□ -0.59
PCP4P48539 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC11.39□□□□□ -0.59
PCP4P48539 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PCP4P48539 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PCP4P48539 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms