Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 LINC02012-201ENST00000608206 1725 ntBASIC13.93□□□□□ -0.18
SNCAP37840 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 AC092364.2-201ENST00000596710 2692 ntBASIC13.93□□□□□ -0.18
SNCAP37840 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SNCAP37840 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SNCAP37840 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.93□□□□□ -0.18
SNCAP37840 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SNCAP37840 AC113347.1-201ENST00000413321 391 ntBASIC13.93□□□□□ -0.18
SNCAP37840 AC096633.1-201ENST00000422446 749 ntBASIC13.93□□□□□ -0.18
SNCAP37840 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.93□□□□□ -0.18
SNCAP37840 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.93□□□□□ -0.18
SNCAP37840 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.93□□□□□ -0.18
SNCAP37840 AC092597.1-201ENST00000487352 616 ntBASIC13.93□□□□□ -0.18
SNCAP37840 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.93□□□□□ -0.18
SNCAP37840 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.93□□□□□ -0.18
SNCAP37840 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SNCAP37840 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.93□□□□□ -0.18
SNCAP37840 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 AC097374.2-201ENST00000618617 1306 ntBASIC13.92□□□□□ -0.18
SNCAP37840 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.92□□□□□ -0.18
SNCAP37840 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 AC092647.4-201ENST00000457211 535 ntBASIC13.92□□□□□ -0.18
SNCAP37840 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.92□□□□□ -0.18
SNCAP37840 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.92□□□□□ -0.18
SNCAP37840 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.92□□□□□ -0.18
SNCAP37840 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 AC133561.5-201ENST00000635547 218 ntBASIC13.92□□□□□ -0.18
SNCAP37840 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SNCAP37840 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNCAP37840 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SNCAP37840 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SNCAP37840 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNCAP37840 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms