Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.18■□□□□ 0.66
COPB2P35606 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.18■□□□□ 0.66
COPB2P35606 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.18■□□□□ 0.66
COPB2P35606 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COPB2P35606 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.18■□□□□ 0.66
COPB2P35606 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.18■□□□□ 0.66
COPB2P35606 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.18■□□□□ 0.66
COPB2P35606 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 FO538757.1-201ENST00000623083 1397 ntBASIC19.18■□□□□ 0.66
COPB2P35606 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPB2P35606 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.17■□□□□ 0.66
COPB2P35606 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.17■□□□□ 0.66
COPB2P35606 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPB2P35606 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
COPB2P35606 TREML5P-201ENST00000421694 576 ntBASIC19.17■□□□□ 0.66
COPB2P35606 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 FAM207CP-201ENST00000443486 507 ntBASIC19.17■□□□□ 0.66
COPB2P35606 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.17■□□□□ 0.66
COPB2P35606 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 IGHV3-42-201ENST00000520410 361 ntBASIC19.17■□□□□ 0.66
COPB2P35606 AC124947.2-201ENST00000547118 1133 ntBASIC19.17■□□□□ 0.66
COPB2P35606 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.17■□□□□ 0.66
COPB2P35606 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.17■□□□□ 0.66
COPB2P35606 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
COPB2P35606 AC073389.1-201ENST00000595595 795 ntBASIC19.17■□□□□ 0.66
COPB2P35606 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPB2P35606 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COPB2P35606 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPB2P35606 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPB2P35606 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.16■□□□□ 0.66
COPB2P35606 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COPB2P35606 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 LINC00895-201ENST00000629028 1637 ntBASIC19.16■□□□□ 0.66
COPB2P35606 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COPB2P35606 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.16■□□□□ 0.66
COPB2P35606 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.16■□□□□ 0.66
COPB2P35606 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.16■□□□□ 0.66
COPB2P35606 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.16■□□□□ 0.66
COPB2P35606 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.16■□□□□ 0.66
COPB2P35606 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 TUBB8P12-201ENST00000308911 1335 ntBASIC19.16■□□□□ 0.66
COPB2P35606 TUBB7P-202ENST00000428444 1305 ntBASIC19.16■□□□□ 0.66
COPB2P35606 TUBB8P7-204ENST00000567960 1332 ntBASIC19.16■□□□□ 0.66
COPB2P35606 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.16■□□□□ 0.66
COPB2P35606 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COPB2P35606 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPB2P35606 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.16■□□□□ 0.66
COPB2P35606 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.16■□□□□ 0.66
COPB2P35606 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPB2P35606 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPB2P35606 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COPB2P35606 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COPB2P35606 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPB2P35606 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms