Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 CYP2T1P-202ENST00000641596 2535 ntBASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.68■□□□□ 0.1
HNRNPCL4P0DMR1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 HCG4P8-203ENST00000443049 980 ntBASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 PAWRP1-201ENST00000451083 565 ntBASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 SCARNA2-201ENST00000458748 420 ntBASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HNRNPCL4P0DMR1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 AC068418.2-201ENST00000577309 3703 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 TSPY19P-201ENST00000418461 509 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 TSPY18P-201ENST00000441642 509 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 FGFR3P6-201ENST00000457012 610 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 AC091304.2-201ENST00000564639 760 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 MTDHP4-201ENST00000600287 670 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 AC008608.2-201ENST00000606089 416 ntBASIC15.66■□□□□ 0.1
HNRNPCL4P0DMR1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms