Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
DUX1O43812 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.08■□□□□ 0.16
DUX1O43812 SLC25A39P2-201ENST00000537614 270 ntBASIC16.08■□□□□ 0.16
DUX1O43812 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 AP000842.3-202ENST00000569238 1080 ntBASIC16.08■□□□□ 0.16
DUX1O43812 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.08■□□□□ 0.16
DUX1O43812 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
DUX1O43812 TUBB3P1-201ENST00000405796 1332 ntBASIC16.08■□□□□ 0.16
DUX1O43812 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.08■□□□□ 0.16
DUX1O43812 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
DUX1O43812 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.08■□□□□ 0.16
DUX1O43812 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DUX1O43812 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.08■□□□□ 0.16
DUX1O43812 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DUX1O43812 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.07■□□□□ 0.16
DUX1O43812 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.07■□□□□ 0.16
DUX1O43812 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.07■□□□□ 0.16
DUX1O43812 KLF2P3-201ENST00000451977 1087 ntBASIC16.07■□□□□ 0.16
DUX1O43812 AC125807.1-201ENST00000483097 614 ntBASIC16.07■□□□□ 0.16
DUX1O43812 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.07■□□□□ 0.16
DUX1O43812 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 AC026150.2-201ENST00000564693 1156 ntBASIC16.07■□□□□ 0.16
DUX1O43812 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DUX1O43812 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.07■□□□□ 0.16
DUX1O43812 AL096865.1-201ENST00000606796 927 ntBASIC16.07■□□□□ 0.16
DUX1O43812 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.07■□□□□ 0.16
DUX1O43812 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.07■□□□□ 0.16
DUX1O43812 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.07■□□□□ 0.16
DUX1O43812 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.07■□□□□ 0.16
DUX1O43812 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 LINC00895-201ENST00000629028 1637 ntBASIC16.07■□□□□ 0.16
DUX1O43812 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DUX1O43812 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DUX1O43812 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.06■□□□□ 0.16
DUX1O43812 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DUX1O43812 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
DUX1O43812 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DUX1O43812 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DUX1O43812 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
DUX1O43812 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DUX1O43812 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.06■□□□□ 0.16
DUX1O43812 SPDYE14P-201ENST00000442619 822 ntBASIC16.06■□□□□ 0.16
DUX1O43812 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.06■□□□□ 0.16
DUX1O43812 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.06■□□□□ 0.16
DUX1O43812 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.06■□□□□ 0.16
DUX1O43812 AC005498.2-205ENST00000593218 784 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms