Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SMAD6O43541 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SMAD6O43541 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.96■□□□□ 0.31
SMAD6O43541 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.96■□□□□ 0.31
SMAD6O43541 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SMAD6O43541 AC243562.1-201ENST00000560672 389 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 AL135744.1-201ENST00000565098 629 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 RARRES2P8-201ENST00000566335 367 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 MIR3909-201ENST00000579518 119 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SMAD6O43541 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 AC027612.4-201ENST00000605371 583 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 AL161645.1-201ENST00000622716 1255 ntBASIC16.96■□□□□ 0.31
SMAD6O43541 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.96■□□□□ 0.31
SMAD6O43541 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SMAD6O43541 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.96■□□□□ 0.31
SMAD6O43541 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.96■□□□□ 0.31
SMAD6O43541 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SMAD6O43541 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMAD6O43541 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMAD6O43541 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.96■□□□□ 0.3
SMAD6O43541 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMAD6O43541 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.96■□□□□ 0.3
SMAD6O43541 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMAD6O43541 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.95■□□□□ 0.3
SMAD6O43541 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMAD6O43541 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.95■□□□□ 0.3
SMAD6O43541 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 AP000344.2-201ENST00000512987 629 ntBASIC16.95■□□□□ 0.3
SMAD6O43541 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.95■□□□□ 0.3
SMAD6O43541 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.95■□□□□ 0.3
SMAD6O43541 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SMAD6O43541 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.95■□□□□ 0.3
SMAD6O43541 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.95■□□□□ 0.3
SMAD6O43541 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.95■□□□□ 0.3
SMAD6O43541 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.95■□□□□ 0.3
SMAD6O43541 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMAD6O43541 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SMAD6O43541 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SMAD6O43541 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.94■□□□□ 0.3
SMAD6O43541 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD6O43541 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD6O43541 AL603756.1-201ENST00000606511 2163 ntBASIC16.94■□□□□ 0.3
SMAD6O43541 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SMAD6O43541 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms