Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00473A8K010 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00473A8K010 MTDHP3-201ENST00000594186 672 ntBASIC13.73□□□□□ -0.21
LINC00473A8K010 AL589182.2-201ENST00000619332 1049 ntBASIC13.73□□□□□ -0.21
LINC00473A8K010 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00473A8K010 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00473A8K010 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00473A8K010 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00473A8K010 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.72□□□□□ -0.21
LINC00473A8K010 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LINC00473A8K010 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00473A8K010 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00473A8K010 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.72□□□□□ -0.21
LINC00473A8K010 AL139011.1-202ENST00000642063 584 ntBASIC13.72□□□□□ -0.21
LINC00473A8K010 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00473A8K010 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00473A8K010 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LINC00473A8K010 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00473A8K010 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 TOP3BP1-201ENST00000420768 1380 ntBASIC13.71□□□□□ -0.21
LINC00473A8K010 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00473A8K010 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00473A8K010 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00473A8K010 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00473A8K010 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00473A8K010 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00473A8K010 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00473A8K010 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms