Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 KRT17P2-201ENST00000300992 1314 ntBASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 AC140113.3-201ENST00000605663 199 ntBASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
MEIS3P1A6NDR6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 KRT8P10-201ENST00000450021 1447 ntBASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 MMP23A-201ENST00000234610 1017 ntBASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 FAM8A6P-201ENST00000407496 1135 ntBASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.49□□□□□ -0.09
MEIS3P1A6NDR6 AC111152.3-201ENST00000569699 673 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms