Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS5Q9UPZ3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.04■□□□□ 0.8
HPS5Q9UPZ3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 AGGF1P2-201ENST00000426656 2106 ntBASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 NKILA-202ENST00000614771 2598 ntBASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS5Q9UPZ3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 OR7E47P-204ENST00000575924 449 ntBASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 AC011676.5-201ENST00000624864 2660 ntBASIC20.02■□□□□ 0.8
HPS5Q9UPZ3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
HPS5Q9UPZ3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
HPS5Q9UPZ3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPS5Q9UPZ3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.02■□□□□ 0.79
HPS5Q9UPZ3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.02■□□□□ 0.79
HPS5Q9UPZ3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 ARSEP1-201ENST00000420443 635 ntBASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 AC025048.6-201ENST00000634326 1161 ntBASIC20.01■□□□□ 0.79
HPS5Q9UPZ3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms